Nick Tustison comments

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                                            Nick Tustison

Determining optimal hyperparameter settings for abdominal CT image registration

Thanks for making them available. However, it looks like the images might not have fully uploaded as I'm only seeing the lower half (see below for an example) even though...

Build failures on Windows for conda-forge package

Awesome. Thanks for this.

tensor flow deprecates alpha in LeakyRelu in favor of negative_slope

Thanks @stnava . We should probably try to start migrating to keras 3. Do you or @cookpa see any issues with this?

tensor flow deprecates alpha in LeakyRelu in favor of negative_slope

Nm. I think the move might still be a bit premature.

tensor flow deprecates alpha in LeakyRelu in favor of negative_slope

THanks @stnava. Yeah, I'm sure it's great. I tried training with it last night but didn't get very far. But we should definitely start thinking about a migration strategy.

tensor flow deprecates alpha in LeakyRelu in favor of negative_slope

I thought we already migrated to keras 3 with some work we did with @cookpa . On my machines, I'm showing keras 3.8.0. Is that not the case?

tensor flow deprecates alpha in LeakyRelu in favor of negative_slope

I see---wrong issue. Yeah, I can fix that.

tensor flow deprecates alpha in LeakyRelu in favor of negative_slope

Okay, I think we can close this but re-open if needed.

Extract the mean cortical thickness of brain regions

Yeah, you would just make sure each atlas is registered to your choice of space. YOu'd have to ask the FSL developers about the use of fslstats. However, given all...

SyGN Example Request

[Several tutorials are available](https://github.com/ANTsX/ANTs#learning-about-ants-examples-etc) showcasing various ANTs functionalities. Template building is [here](https://github.com/ntustison/TemplateBuildingExample).