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nf-core
Repository to host tool-specific module files for the Nextflow DSL2 community!
> [!WARNING] > Please open PRs against the `batch_update_staging` branch. Then we can have small, easy to review, atomic PRs but also merge all batch updates to the modules repo...
### Is your feature request related to a problem? Please describe Port hla-la to nf-test from pytest. Include both preparegraph and typing. ### Describe the solution you'd like _No response_...
Couldn't find NF module for LoFreq3. I think it'd be good to have one. ### Is there an existing module for this? - [X] I have searched for the existing...
Markov Affinity-based Graph Imputation of Cells (MAGIC) is an algorithm for denoising high-dimensional data most commonly applied to single-cell RNA sequencing data. source: https://github.com/KrishnaswamyLab/MAGIC ### Is there an existing module...
Deep count autoencoder for denoising scRNA-seq data source: https://github.com/theislab/dca ### Is there an existing module for this? - [X] I have searched for the existing module ### Is there an...
Bayesian inference of gene expression states from single-cell RNA-seq data source: https://github.com/jmbreda/Sanity.git ### Is there an existing module for this? - [X] I have searched for the existing module ###...
