Daniel Nicorici

Indeed, it would be great to have support for clicking edges!

Hi @pkerbs I have not been able to replicate the issue, probably because of different versions of BBDuk being used. I have used here BBMap version 38.44. In your case...

Hi @pkerbs indeed your are right the reads are 100 bp long. As I wrote before I was not able to reproduce the bug that you reported. Here is how...

Hi @Coaxecva FusionCatcher runs several external tools and programs. Here it looks like one of them is failing but it is not clear which one. That information is in fusioncatcher.log...

The error comes from [bbduk.sh](https://jgi.doe.gov/data-and-tools/bbtools/bb-tools-user-guide/bbduk-guide/) that is part of [BBMap](https://jgi.doe.gov/data-and-tools/bbtools/bb-tools-user-guide/bbmap-guide/). BBduk basicaly complains that is something wrong with the input FASTQ file, more precisely ``` Problematic read number 277351: @HWI-ST173R:607:D1C5FACXX:8:1106:4415:59068/1...

Hi @Coaxecva I am able to reproduce the issue. For some reason BBDUK guesses wrong the qualities in the FASTQ file. Until this bug is fixed in FusionCatcher and BBDUK...

Thanks! I confirm that indeed it is a bug.

So, finally I have had some time for looking into this but now the link above is broken. I am not sure if this can be fixed without it.

Hi, conda installation for FusionCatcher does not work. It needs to be updated. If someone would jump here and help would be great! Cheers, Daniel

@praveenraj2018 It looks like libtbb is not installed. Probably this would help on Ubuntu: ``` sudo apt-get -y install libtbb-dev libtbb2 ``` It is not clear why conda does not...