Ming Wang

Link to file to be clustered [Link](https://proteomics2.ucsd.edu/ProteoSAFe/DownloadResultFile?task=690714c8c2434ab3ad76c6323bd0c4bd&file=demangled_spectra/35d69cc15cc74008bdd5046f2177eb5b/query_results/extracted/extracted.mzML&block=main&process_html=false).

Yeah, I agree (especially with regards to how MSCluster performed) Falcon is doing a pretty good job. Just thought it would be interesting to investigate these stragglers as they do...

I think this is a good initiative. One thing that we might want to consider on the analysis portal side to make it easier for people to get it into...

Happy to chat. We've also done some work on our end for harmonizing metabolights with other repositories in metabolomics so hopefully our work/insight is helpful.

Hey @timosachsenberg definitely. I've made one before, just never got around to it for this. Though I will say, for the time being because conda does support pip in env...

Will give it a try! I've done it once but this time we'll actually learn to do it easily! Thanks for the feedback and hope it's useful!

I think these are usually meant for real files not just libraires. Duplicates we can remove, but not the substantive queries.

Yes, your job just took too long on GNPS so it was killed. The mz_upper and mz_lower, are by definition above and below the "comment" which is the value of...

Awesome! Good luck with it and feel free to ask questions and contribute.

Hi Yann, sorry for the delay! Yes, DIA should be no problem. QUERY scaninfo(MS2DATA) WHERE MS2PROD=226.18:TOLERANCEPPM=5 should totally be fine, and so you'll find AIF scans that have that product...