Ming Wang

This is a good point. Iteratir needs renaming. Could you throw a PR for this and an example file and we can write a small unit test to make sure...

I'm not sure if I understand the issue. Does running with 150 max component size not work on GNPS2? Ming On Mon, Feb 3, 2025 at 6:46 AM IngvildRyde ***@***.***>...

Thanks for the update, yes we'll have to look into it! Ming On Tue, Feb 4, 2025 at 5:54 AM IngvildRyde ***@***.***> wrote: > Thank you for your answer >...

You can use a metadata file: https://wang-bioinformatics-lab.github.io/GNPS2_Documentation/metadata/ On Fri, Feb 21, 2025 at 5:21 PM Yuanyuan ***@***.***> wrote: > Hello, I used different collision energies (10-50V) to collect data when...

Classical and FBMN are separate tracks of data analysis. If you want to analyze after feature finding then FBMN is your best bet. Otherwise raw data, you can use in...

Use the export to cytoscape button

I’m sorry I can’t read through this message On Tue, Mar 4, 2025 at 5:27 PM Yuanyuan ***@***.***> wrote: > https://ccms-ucsd.github.io/GNPSDocumentation/fileconversion/ Convert > as in this link. ---- Replied Message...

My recommendation is to checkout these workflows, these might be more helpful: https://github.com/Wang-Bioinformatics-Lab/GNPS2_Workflows

Oh the above is the source code - you can run those pipelines on your own computer if you'd wish. As for accounts, i think this will help: https://wang-bioinformatics-lab.github.io/GNPS2_Documentation/accounts/