Ming Wang
Ming Wang
Would be a great starter issue for Kevin.
> Should this be a general validator or for the MZmine output? > > We should also consider the Ion Identity Networking columns in the quant table This can be...
@kevinnguyen1413 Any updates on this issue?
The code that should be updated is here: https://github.com/CCMS-UCSD/GNPS_Workflows/blob/master/feature-based-molecular-networking/tools/feature-based-molecular-networking/scripts/mzmine2_formatter.py The specific aims are outlined in the main issue text. If you have questions about the mzmine2 output format, we have...
@kevinnguyen1413 Any updates on this issue?
I have updated the testing: https://github.com/CCMS-UCSD/GNPS_Workflows/blob/master/README.md#testing
The basic functionality is there, needs to be hooked up into workflow code. @mwang87 will tackle
the cross origin server we were using no longer works but have created a new CORS service at GNPS that will help with this. This will be out in the...
Do you have the files you could attach to this issue?
We really dont have a mechanism for this in GNPS to take your own mgf and have it work. You'll need to follow these directions: https://ccms-ucsd.github.io/GNPSDocumentation/batchupload/#creationpublication-of-spectral-library Do you need Morgan's...