A. Murat Eren (Meren)
A. Murat Eren (Meren)
Your PR looks lovely, @ivagljiva, and I left a minor comment, but I think it is good to go if you don't want to deal with that. Probably we can...
We still haven't done that. As the OP says it is doable via programs such as `anvi-export-collection`, `anvi-import-collection`, and `anvi-merge-bins`, but it requires additional text file wrangling in the command...
Hi @sttongjai, This looks like a memory issue. It is possible that your docker containers are initiated with the default memory settings and you may need to increase max memory...
[BUG] Anvi'o should check write permissions of databases before doing computationally expensive work
AFAICR we added some solutions to handle permission issues with centralized checks in `db.py`. Since it is from over 2 years ago and we haven't heard additional complaints, let's close...
Hey @Sirbius, would you please consider using the Docker container for `v8`? Plus, ``` Alignment sequence length ....................: 509,496 ``` 0.5 million nucleotides is a little too much for any...
Hi @MrCorylus, would you mind sharing with me a private download link for the PAN.db and genomes storage (GENOMES.db) via email so I can take look at the data before...
Hi again Andrea, Thanks for the email. > We tried to use the flags with the parameters you suggested, but we still obtain more than 3000 clusters, which is too...
I second this. It would have been very useful as you would not have to click every split when you zoomed in to a particular region of the display or...
Thank you for the heads-up, @ISonets!
Let's keep this open for a little longer :) Thank you for going through all these issues, Iva!