A. Murat Eren (Meren)

Results 321 comments of A. Murat Eren (Meren)

> @meren can we also have an artifacts_accepted option? This is now done, @mschecht.

Hey @tdelmont, I don't think you missed anything. It looks like a bug to me. We don't have anyone working on the interactive interface at the moment, so it will...

Hi @vinisalazar, thanks a lot for looking into this. Of course you are more than welcome to send a PR. I remember looking at his and realizing that addressing this...

Thank you, @vinisalazar. Please feel free to make additional changes. Given that now both `anvi-script-reformat-fasta` and `anvi-gen-contigs-database` work with gzipped input files properly, I think another quick improvement could be...

holy smokes :) what a great idea!

How much manual curation is involved here for this commit?

(asking because I couldn't find where you posted the transcript of your convo (am I being thick? is this literally a copy-paste from the prompt into `db.py`?))

![image](https://user-images.githubusercontent.com/197307/230884366-ea3c35a8-f865-4e66-bccc-2e6e14ce8661.png)

It is *absolutely* very useful. Thank you very much for sending your prompt

Maria, the error message says use `--ignore-deflines` if none of this makes any sense. Did you try doing that?