Marwan Abdellah

Results 16 comments of Marwan Abdellah

@jplanasc The ticket has been created here.

@orena1 I am working on implementing the multi-layer soma. Can you provide a sample SWC file with reconstructed soma?

@orena1 The profile is projected on a single plane. Don't you have another one with real 3d profile. ![3d-soma-plane](https://user-images.githubusercontent.com/1279443/100143037-055e4100-2e95-11eb-9bdd-7d3d81657a28.png)

@orena1 I was able to load and render the neuron, but I don't even find any contours to the soma. Are you sure they exist? ![2017-13-02-slice-2-cell-3-rotated_morphology_front-1](https://user-images.githubusercontent.com/1279443/149318734-14f4bab1-9e5f-4e32-97db-1365d127fea7.png) ![2017-13-02-slice-2-cell-3-rotated_morphology_front-2](https://user-images.githubusercontent.com/1279443/149318738-7c006446-6aeb-4508-9341-2c0928df6855.png) Projections with closeup...

Do you mean it is not working only for this file on Windows?

Dear @EmanuelSchirm Would you please share the SWC file and I will try to debug it? Thanks,

After investigation, I can confirm the following. 1. The SWC file is not formated in the standard way as indicated by the SWC [documentation](https://docs.arbor-sim.org/en/stable/fileformat/swc.html#arbor-interpretation). The types of the samples (second...

@markovg We have partial implementation, but it has not been tested yet. I will work with someone from the Viz to get it completed as soon as possible and will...