Marius Pachitariu

The data should be an an int16 binary file. This looks like either the file only has zeros, or the format is different. Also, 3 sec is really short, I...

Sorry, I haven't updated that for Kilosort3 yet. "learnAndSolve8b" is no longer used.

This was a feature in the Matlab version that we should be able to bring back, but it'll probably have to wait a bit.

Could you please try to implement it yourself and contribute it back to Suite2p as a pull request?

It looks like you have a region on the probe with few spikes / high noise. You can reduce the number of blocks for drift correction and/or you can increase...

Something isn't right here, could you please double check your configuration file? I am running it fine with several channels disabled via connected(k) = 0. NchanClosest should be 10, so...

I see now, thanks. It has to do with the lower number of channels then when you remove those 10. We are in the process of patching the code so...

Good catch, sorry for the lack of detail. There is one branch of Kilosort2 where this is implemented, but I think I have to clean it up first. It just...

That is a Matlab built-in function, so you'll have to ask them... It's possible their implementation changed, but it's unlikely to affect the results very much.

A single set of parameters should work well for all data from the same probe and prep. The default set of parameters should work well in most cases. If this...