Jianshu_Zhao

Hello @ksahlin, I will test again soon using the newest commit. If it is very close to bwa/bowtie2, then I will suggest the entire metagenomics community to StrobeAlign. Thanks, Jianshu

Thanks Chirag，I also noticed this in that kc-c1.c why all veesus all is consuming so many memory？any possibility to reduce somehow if dna string is already compressed. Thanks Jianshu

or we need to implement compression for fastANI？ Thanks. Jianshu

Hello Chirag, If there is no need to do string compression for fastANI, I will close this issue. Thanks, Jianshu

Hello， Thanks for the response. However，it is a computer cluster，which I do not have sudo access but only a conda environment with R installed，I can have access to everything in...

Thanks! Oh I missed it. I will try and get back. Jianshu

I have the same issue with 0.5.0 but. Is it solved?Thanks

i do not think it's solved. Still cannot use it.

add def main() to replace the if main line and also add if line and a new main() at the end of enrichm script

Hello All, Glad to see that this was discussed 3 years ago. I am wondering whether arm64/neon popcount can also be added or something, not only count byte. Thanks, Jianshu