Jianshu_Zhao

I still have the same error with rust 1.70 (3.20.2023), I am using v0.15, could this be the reason? Thanks, Jianshu

Hello @mike-kfed , It is my collaborators' work, see here: https://github.com/jean-pierreBoth/annembed You have to remove the features in this line in Cargo to make it run for MacOS M1: hnsw_rs...

Hello @mike-kfed ， The hack is to use accelerate but if we do want to use openblas static as backend for ndarray and ndarray-linalg，what would be the solution here for...

can you please share the embed binary after compiling annembed with openblas-static feature？ Thanks， jianshu

@blagowtf , I was also asking this question in another issue. ndarray supports Accelerate.framework it seems (I can use accelerate as backend instead of openblas-src). ndarray-linalg does not support yet....

More importantly, the performance of openblas-src on MacOS is significantly slower than on linux due to the well known bad performance of OpenMP on MacOS (e.g. parallel for or others)....

The src support of accelerate framework is here: https://github.com/blas-lapack-rs/accelerate-src Jianshu

Hello @fgvieira , Just curious whether the Json can be again formatted into CSV or data frame so that it can directly used for ggplot2. The default R plot engine...

Hello Zekun， Many thanks for the quick response. I would love to test on macOS aarch64 and I also think the sse2neon will be very useful to port sse to...

Hi all, Just want to add a followup question, Does SibeliaZ also work for slightly distantly related genomes, e.g., average nucleotide identity is above 92% for example (human genomes are...