Jianshu_Zhao

@Sam-Shebin Can you please do that ASAP? Thanks, Jianshu

@mataton, Hi Matt, I saw the this PR from Shebin is not merged due to some testing error, which both Shebin and I are not familar with. Can you please...

Hi Qiyun and Mat, how about this one. I do not understand why it failed only in Ubuntu but not macOS. -Jianshu

Hi @mataton, Thanks I will add some basic tests. However the data has to be in a CSV format from a file. In that case, the test will need to...

For input we do not because I streamed the edge list. For output yes， output is just numpy vectors.

How about PacBio since it is highly accurate and I can imagine the default kmer length should work? Best, Jianshu

Hi @bingyinglee, The output file size is only related to the sketch size (--sketchsize64 M and --bbits N option) if your purpose is to compute genomic distance among your files....

Hi @peterjc, Thanks for the correction and yes I realized it several weeks ago. We will have an update soon and will use the correct bioconda link. Best, Jianshu

Hello @endixk, Yes I was asking for a list of files, but the fold should also work it seems. How about extract and build the database, also a fold of...

Thank you so much！ This will make it very useful for large scale comparisons. Jianshu