Jennifer Hillman-Jackson
Jennifer Hillman-Jackson
IUC issue: https://github.com/galaxyproject/tools-iuc/issues/1910 PR fix: https://github.com/galaxyproject/tools-iuc/pull/2209 Test these: - [x] ~~Strip out the default search terms so that none are present. The form should abort job submission and tell users...
https://github.com/galaxyproject/tools-iuc/pull/2285
Example files, **uploaded via URL or browser**: - https://zenodo.org/record/290221/files/dexseq.gtf - https://zenodo.org/record/290221/files/Drosophila_melanogaster.BDGP5.78.gtf Test history: - https://usegalaxy.org/u/jen/h/gtf-sniffed-as-gff Tutorial: - https://galaxyproject.github.io/training-material/topics/transcriptomics/tutorials/ref-based/tutorial.html Data Source: - https://zenodo.org/record/290221 Interestingly, `gff3` is now accurately sniffed as `gff3`...
Ticket at IUC repo: https://github.com/galaxyproject/tools-iuc/issues/2300 Prior fix/update tickets (closed) -- include test history https://github.com/galaxyproject/usegalaxy-playbook/issues/182#issuecomment-464163384 https://github.com/galaxyproject/tools-iuc/issues/1917 https://github.com/galaxyproject/tools-iuc/issues/1910
Failure is always `(33, "HTTP server doesn't seem to support byte ranges. Cannot resume.")` paired with `Remote job server indicated a problem running or monitoring this job.`. Test history that...
EU has the tool installed: [Remove Unwanted Variation from RNA-seq data](https://usegalaxy.eu/tool_runner?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Fruvseq%2Fruvseq%2F1.16.0) MTS: https://toolshed.g2.bx.psu.edu/view/iuc/ruvseq/c24765926774 Request: https://help.galaxyproject.org/t/remove-unwanted-variation/1160
Seems new (?) **Upload -- one entry** **Edit Attributes -- two entries**
Galaxy repo ticket (closed from dev end): https://github.com/galaxyproject/galaxy/issues/3235 cc @MoHeydarian since you opened the /galaxy dev fix ticket for this. I'm going to try to find > close out any...
Depends on this issue being fixed and pushed back to Main first: https://github.com/galaxyproject/galaxy/issues/7473
MTS https://toolshed.g2.bx.psu.edu/view/iuc/seqtk/a09586d5149a usegalaxy.org currently is several revisions behind, at 1.2.0 usegalaxy.eu has the most current version, 1.3.1 There is a bug fix with at least one of the tools (seqtk_sample...