cellxgene_VIP
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interactivereport
Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also pe...
@z5ouyang Upon upgrading cellxgene to version 1.0.1, the plugins are not available anymore!
Hi, I am trying to build a docker container based on the steps from VIP - https://github.com/interactivereport/cellxgene_VIP: ``` FROM python:3.8 COPY ./cellxgene_VIP /cellxgene_VIP RUN apt update RUN apt install jq...
Hello, I am using cellxgene VIP for plotting heatmap for gene expressions for different annotations loaded. I get the following error while selecting `Complex heatmap` `ERROR @server: Traceback (most recent...
Hi, thank you for the great work! After trying a few hours to solve the installation problems, I still face errors while running the conda environment from VIP_conda_R.yml. Solving environment:...
Hi Is there a simple way to launch cellxgene instance with a password so only users with a password can access it?
Hi there, so I have started a cellxgene project and as I want to use multiple datasets and also keep the plug in VIP, I have combined both extensions ([](https://githubhot.com/repo/interactivereport/cellxgene_VIP/issues/56))...
Hi Young, After I updated the VIPInterface.sh recently, I still meet the visualization problems, as the following picture:  e: Any suggestions?
Hi, I would like to deploy the cellxgene VIP result with Heroku and would like to know how to modify the "Dockerfile" provided by cellxgene Here is my modified version...
as per the title request, I gave tried to adapt the code to version 0.17 but the backend server directory tree dramatically changed and I have several errors. Can you...
Is it possible to aggregate cells by a specific metadata category, say Donor, and compare across another metadata category like Treatment status? I find this way to be easier to...
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Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also pe...