Peter Heringer
Peter Heringer
But this can still be checked very fast, right? So their would still be no need for letting the user specifiy k?
To generate an HTML report, you can use the `report` command as: `panacus report `. For this you need a file containing the configuration for the HTML report you want...
Addressed by 74d188d
Hi Taek, what exactly isn't working for you? Is the .tsv outputted by `panacus ordered-histgrowth` fine? If you want to exclude the reference sequences from the graph you can create...
Hi Taek, hmm, for me the plot shows the sample names on the x-axis. What version of panacus are you using? With regards to the sample order: if you want...
Hi Taek, okay, so the plot showing numbers instead of the sample names is an issue that is fixed in the version on GitHub, however the fix is not yet...
Hi Taek, unfortunately, I don't think that I can update the conda version of the package, maybe @lucaparmigiani or @danydoerr can help? In the meantime installing from scratch via GitHub...
Hi Taek, could you try the "From repository" option? The binary release is unfortunately the same version as the conda version. Best regards Peter
Hi Taek, yes, that looks good. Yes, there is currently work on a new release done, so that should fix the problem also for all other versions of panancus. Best...
Hi Taek, the `-l` option describes the coverage needed for a feature to be included in the calculation. In the case of `-l 2` it does not mean that only...