Jeff Hammerbacher

As noted by @llevar

As suggested by Andrew Uzilov

cc @timodonnell

Large design issue but @iskandr noted, when looking at @arahuja's variant calls for Josh Brody, that it's hard to tell when a somatic variant is also present in the germline...

Add link to pileup in table row

1

Would be nice to not require two clicks to see a pileup.

Cf. [Histoimmunogenetics Markup Language 1.0: Reporting next generation sequencing-based HLA and KIR genotyping](https://www.ncbi.nlm.nih.gov/pubmed/26319908/) (2015)

Expand our benchmark data

2

One thought: ImmPort has a lot of vaccine studies w/ HLA type and RNA-Seq data (maybe some have germline WES?)

Try out on long reads

1

### Oxford Nanopore - [NA12878](https://github.com/nanopore-wgs-consortium/NA12878) WGS data ### PacBio - PGV001 patients

We can use the data generated for the PGV benchmarking!