noctua

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It would be really helpful if GO terms in the do not annotate subsets: - subset: gocheck_do_not_annotate - subset: gocheck_do_not_manually_annotate were blocked from usage in Noctua, preferably with a warning...

krchristie

In order for curators to know which entities and ontologies are available for use in Noctua, we'd like to generate (perhaps as a pipeline product?) a readily accessible list of...

vanaukenk

Explore using the ShEx to define a subset of RO that can be used in Noctua for GO

3

This is following up on a discussion from the 2020-02-29 gocam specifications call. Given that we are defining, in the ShEx, the relations that curators should use in GO-CAM models,...

vanaukenk

CC gets through to Snapshot from model, but BP and MF are missing

5

We've had nearly constant issues with annotations being made in Noctua, and several weeks later they're still not in SGD. The latest case: SGD made ND CC, ND MF, ND...

suzialeksander

From 2021-11-23 Alliance Pathways call: There are some GO-CAMs that don't meet the 'three, chained causal relations' threshold for Alliance Pathways display, but that do represent pathway-centric models that curators...

vanaukenk

This is a coordinating super to help keep track of the separate issues around implement new metadata tags in the Noctua / GO-CAM universe to support distinguishing standard and causal...

kltm

This is a request for a trigger we had in the MGI GO annotation module. If there were existing root annotations for a gene, the upon entering a new annotation...

hdrabkin

Make some comments read-only

4

Comments that are automatically added as part of the automatic ontology updates should be read-only. If not, there is the possibility that they would be mistakenly deleted and we'd lose...

vanaukenk

Clean up and harmonize workbenches menus across Noctua

1

Goal here is to review the list of current workbenches in each place there's workbenches menu, decide what we want to keep, and then harmonize the menus across Noctua. Assigned...

vanaukenk

I woke up thinking: I am beginning to think the maintenance windows and many emails to save models and outages is really not very smooth user experience, but more also...

tmushayahama