noctua

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Filter ontology term dropdowns to exclude gocheck_do_not_annotate

2

We want to prospectively stop further creation of annotations to `gocheck_do_not_annotate` I believe this is just a matter of adding an extra `qf`; this is an example of the SOLR...

cmungall

Proposed change for what qualifies for addition of "contributor" annotation

3

Currently, any modification of a model will get a user as a contributor of a model. ## Proposal: * distinguish curation vs metadata about a model * a user will...

lpalbou

Define mapping between Causal Tab and Noctua OWL

6

The SIGNOR database uses CausalTab to represent causal interactions. I'm not sure where the official CausalTab format specification lives, I've found this: http://signor.uniroma2.it/scripts/causalTabInfo.php It appears to be an extension of...

cmungall

curator-driven 1-time bulk loads

4

Hi, This morning at MGI's weekly GO curator meeting, we were discussing the need for a mechanism to allow curators to trigger a bulk load for one-off cases that arise...

krchristie

Further constrain the ECO subset available

1

Currently we use an ECO subset that restricts to "manual" terms. This includes terms that are likely too narrow experimentally: ECO:0005652 ! methidiumpropyl-ethylenediaminetetraacetic acid iron (II) footprinting evidence used in...

cmungall

Determine type and number of inferred annotations in Noctua models

8

We need to decide if the inferred annotations derived from Noctua models are adding valuable knowledge to our standard GO annotations. To do this, it would be very helpful to...

vanaukenk

Unable to add CC as AE without appearing as individual CC annotation

22

http://noctua.geneontology.org/editor/graph/gomodel:5b91dbd100000065 In this model, I'm trying to state the MF occurs_in the GO:0005775 vacuolar lumen as an an extension (in Protein2GO under PMID:29514932). We don't want to add a separate...

suzialeksander

Preserving layout in the pathway editor between sessions

1

Would there be a way to keep the last layout of the elements in a GO-CAM model done in the pathway editor when it is opened again in another session?...

rozaru

Maintaining the zoom settings when adding new activity unit in the pathway editor

1

When I use the zoom out option and then I create a new activity unit, the zoom setting is not kept and revert to the original default zoom setting. It’s...

rozaru

Selecting multiple elements and moving them at the same time

1

Is there a way to move multiple elements of a GO-CAM model at the same time in the pathway editor? For example, when you want to move an activity unit...

rozaru