go-annotation

go-annotation copied to clipboard

* **PTHR ID & PTN node:** PTN000005674 (PTN000005673) * **Sequences with problematic annotation (ID + gene/protein name):** Pi3K68D (FBgn0015278) and orthologs * **Type of Issue: Erroneous source or erroneous propagation,...

sjm41

* **PTHR ID & PTN node:** PTN000806614 (PTHR10155) * **Sequences with problematic annotation (ID + gene/protein name):** fly Socs44A, Socs16D, Socs36E * **Type of Issue: Erroneous source or erroneous propagation,...

sjm41

Review annotations to GO:0047760 butyrate-CoA ligase activity

1

Dear all, The proposal has been made to obsolete GO:0047760 butyrate-CoA ligase activity and replace it by GO:0031956 medium-chain fatty acid-CoA ligase activity see https://github.com/geneontology/go-ontology/issues/25800

pgaudet

GO:0005886 | plasma membrane | IEA with PTHR10134:SF20 This one is odd. The PANTHER family is called PANTHER | CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL and there doesn't appear to...

ValWood

* **PTHR ID & PTN node:** * PTN002309998 * [GREMLIN 1 (PTHR15283)](http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15283) * **Sequences with problematic annotation (ID + gene/protein name):** * FB:FBgn0038901 , Burs * **Type of Issue: Erroneous...

hattrill

UniProtKB:O14114 | abo1 | involved_in | GO:0045944    positive regulation of transcription by RNA polymerase II | ECO:0000318   IBA | GO_REF:0000033 | PANTHER:PTN000552695 more... | 284812 Schizosaccharomyces pombe (strain 972 /...

ValWood

Dear all, The proposal has been made to obsolete GO:0010035 response to inorganic substance GO:0010035 see https://github.com/geneontology/go-ontology/issues/27194

pgaudet

* **PTHR ID & PTN node:** PTN000025022 (PTHR10210) * **Sequences with problematic annotation (ID + gene/protein name):** Dmel FBgn0039790 | CG2246 Human PRPSAP1/PRPSAP2 * **Type of Issue: Erroneous source or...

sjm41

Review annotations to [aromatic compound metabolic process/ cellular/nitrogen compound metabolic process]/ heterocycle metabolic process

11

Dear all, The proposal has been made to obsolete GO:0006725 cellular aromatic compound metabolic process GO:0019438 aromatic compound biosynthetic process GO:0019439 aromatic compound catabolic process No regulation terms GO:0034641 cellular...

ValWood

PTN000162283 (PTHR43380) & PTN000178893 (PTHR42980)

1

* **PTHR ID & PTN node:** PTN000162283 (PTHR43380) * **Sequences with problematic annotation (ID + gene/protein name):** Human P12694 and orthologs * **Type of Issue: Erroneous source or erroneous propagation,...

sjm41