go-annotation

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This should be a MF GO:0051208 sequestering of calcium ion GO:0061454 release of sequestered calcium ion into cytosol by Golgi GO:1903514 release of sequestered calcium ion into cytosol by endoplasmic...

pgaudet

GO:0014723 regulation of skeletal muscle contraction by modulation of calcium ion sensitivity of myofibril GO:0014722 regulation of skeletal muscle contraction by calcium ion signaling GO:0014809 regulation of skeletal muscle contraction...

pgaudet

Review annotations to GO:0140035 ubiquitination-like modification-dependent protein binding & children

9

GO:0140035 ubiquitination-like modification-dependent protein binding GO:0140037 sumo-dependent protein binding GO:0140036 ubiquitin-dependent protein binding Annotations are here: https://docs.google.com/spreadsheets/d/18dk19bOMaRqBYBmsAde6_mWQCPxA4Y39RVgwbHlO57Q/edit#gid=0

pgaudet

Review annotations to GO:0040031 snRNA modification

pgaudet

Review annotations to GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic (and some descendants)

11

Dear all, The proposal has been made to obsolete: GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic GO:0043928. exonucleolytic catabolism of deadenylated mRNA GO:0034428. nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3' GO:0070480 exonucleolytic...

ValWood

This is to check annotations to confirm that we can rename terms to L-leucine xx. GO:0071233 | cellular response to leucine GO:0070728 | leucine binding GO:0009098 | leucine biosynthetic process...

pgaudet

KDEL receptor not IRE1-mediated UPR

1

This doesn't seem quite right The KDEL receptor, when mutated activates the UPR (likely due to loss of resident ER proteins)

ValWood

Dear all, The proposal has been made to obsolete GO:0106163 regulation of exonucleolytic catabolism of deadenylated mRNA GO TERM ID: GO TERM see https://github.com/geneontology/go-ontology/issues/27171 Experimental annotations that need to be...

ValWood

* **PTHR ID & PTN node:** GO:0005788 | endoplasmic reticulum lumen | IEA with PTHR45188:SF2 * **Sequences with problematic annotation (ID + gene/protein name):** https://www.pombase.org/gene/SPBC543.02c * **Type of Issue: Erroneous...

ValWood

PTHR10782:SF97

1

* **PTHR ID & PTN node:** GO:0003712 | transcription coregulator activity | IEA with PTHR10782:SF97 | GO_REF:0000118 GO:0006357 | regulation of transcription by RNA polymerase II | IEA with PTHR10782:SF97...

ValWood