Elmar Pruesse

Results 91 issues of Elmar Pruesse

Should create `reports/{project}.{d1}.{d2}.[...].html` with reports for each stage.

stage

As the stage stack requested imposes full order on the partial order implied by processing graph, a graph is implied by multiple stacks. To avoid redundant computation, the effective stack...

Array values, e.g. multiple input files, should be expandable as CSV as is often needed for tools accepting many input files. ``` rule bla: input: r1 = "{dir}/{:sources:}.{:pairnames[0]:}.fq.gz", r2 =...

enhancement

`mem` is currently a param - [ ] make it a `resource:` - [ ] add `mem_gb` and `mem_mb` - [ ] verify that all rules have a reasonable value...

enhancement