Eric Deutsch

Results 297 comments of Eric Deutsch

Here's what I see in the elog: ``` 2023-09-27T14:37:51.704246: INFO: ARAXBackgroundTasker status: waiting. Current load is (0.3, 0.39, 0.4), n_clients=0, n_ongoing_queries=0 2023-09-27T14:38:51.942820: INFO: ARAXBackgroundTasker status: waiting. Current load is (0.5,...

I like it. I think we can totally do this by demo time.

yeah, I've been musing about it a bit. I was also wondering if we can use our new, much expanded KGNodeIndex to do more or less the same thing. KGNodeIndex...

the issue for translation is this: if a query comes in with SNOMEDCT:41345002, I can trivial learn that all the synonyms for rickets: rickets = ['HP:0002748', 'DOID:10609', 'CUI:C0035579', 'CHV:0000010891', 'HPO:HP%3A0002748',...

I have implemented this new method in ARAXMessenger in `demo`: result = messenger.reassign_curies(message, { 'knowledge_provider': 'KG1', 'mismap_result': 'WARNING'} ) It will loop through the QueryGraph in a message (not the...

As noted in the call, there was a time that some versions of the TRAPIResponseValidator required a **message** object as input (despite the name of the program/class). Richard has since...

Today/tonight after merging some provisioning PR (https://github.com/RTXteam/RTX/pull/2206/files), Pouyan tried to get KG2 up and running again. It resulted in two separate downtimes of 2h45m while it was "downloading the databases":...

FWIW I install Docker on Ubuntu with: ``` sudo apt --yes install docker.io ```

> create an override to point to the local RTX-KG2 API: > > ``` > echo "http://localhost:5008/api/rtxkg2/v1.2" > RTX/code/kg2_url_override.txt > ``` We are at v1.4 now..

This is xCRG implementation. Complete.