Harshil Patel
Harshil Patel
Ping @saramonzon @svarona
Hi @Aqsakhalid30 ! The easiest way to overcome this is to pull the containers before you run the pipeline. You can do this by using the latest version of the...
We will be adding more genomes in the future @MaxUlysse . I mainly want to get this in so users can test it properly. Will definitely add docs then 👍🏽...
Ah dammit! Good spot. Ok, will revert it back.
Done @MaxUlysse ! This custom rnaseq stuff has already been fixed for the next release anyway :)
POC so will convert to draft.
Coooool beans!
No idea @ewels 😕 Although, it is quite weird that `CHECK_SAMPLESHEET` which is the very first process is being re-run whereas the jobs proceeding it like `FASTQC` and `FASTP` are...
What if we add a `--mem_per_cpu` option to the template? Could use that to calculate and override memory if specified. This is exactly why I reduced the memory in `base.config`...
Will something like the below work if specified in an Institutional config? ``` process { memory = { task.cpus * 6.GB } as nextflow.util.MemoryUnit } ``` I'm assuming that will...