pygtftk

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This is in progress and will be part of the next libgtftk release.

dputhier

I was wondering about a command allowing the selection of the most commonly used TSSs among transcripts described for a gene.

dputhier

Blast output to GTF

1

It could be interesting to propose a blast to gff/gtf output as required in this post on biostar: https://www.biostars.org/p/277/

dputhier

Could be helpful to have a split command. e.g gtftk split -k gene_biotype gtftk split -k chrom

dputhier

divergent / convergent list of transcript

1

In the current implementation only a single transcript is added in the "divergent" key. The list of all of them should be returned.

dputhier