phy

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Error related to mouse_wheel

2

Hello all! In the CorrelogramView, I was rolling my mouse (perhaps too much), and then I got this error:  Phy was working fine before. I've tried re-installing Phy but...

phanhuynh

Output data of phy

3

Hi, I would like to further analysis electrophysiological data after manually inspect by phy. Could you please tell me how can I output channel with largest amplitude and their trace...

linjianian

Problem with WaveformView

3

WaveformView is showing flattened spike waveforms, how can I fix it? 

FraCost

Waveformview- toggle mean waveforms does not work

3

Hey, I am using phy2 to curate my data (which is sorted with kilosort2.5) and I try to switch between the template view and the mean waveform view to make...

JannaAarse

In WaveformView, channel locations incorrect

1

Hello ! First, thank you for your help! In Phy's WaveformView, the location of the channels do not match the location I entered into Spikeinterface. Here is the probe file...

phanhuynh

only one waveform being displayed per cluster in WaveformView

8

Hi, I am using phy (v2.0a1) to visualize data analyzed with klusta. OS is Ubuntu 20.04. No matter the value I set n_spikes_waveforms to, only 1 waveform per cluster gets...

atranvan

Finding Spike Channel IDs

4

Hello, I sorted the data using SpykingCircus and exported to phy. When I run phy I can see channel ids for each cluster but I cannot find this data in...

argunsah

Hi there, I'm using 64-channel single shank probes from CN, and sometimes in the phy visualisation of the traces I get these strange 'chunks' after spike-sorting with KS3 or KS2.5:...

ross-folkard

Error while running

7

Hi, I received this error while running Phy on some of the sorted data! QWidget: Must construct a QApplication before a QWidget zsh: abort phy template-gui params.py

farazmoradi

phy2 plugin access individual spike wavefrom from cluster

1

Hello, I am trying to write a plugin for some automatic spike removal to clean up a cluster. To do this I would like to compare an individual spike to...

GrimmSnark