phy

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Data for Phy

1

Hi, how can I found the data that has been used for YouTube video by nick? https://www.youtube.com/watch?v=N7AsWVk5JVk

farazmoradi

Phy views do not update automatically after changing another cluster

1

Hi. I met a problem when open the phy gui. $ phy template-gui params.py --clear-state when the gui open, it looks good when first choose a cluster and its similar...

yuan0821

I get the following repetitive message while running phy2: XmbTextListToTextProperty result code -2 Also phy is running really slow, there is a long wait after switching clusters or any other...

benefron

Split cluster based on raw amplitude view

2

Hi all, Does anyone know of a way to split clusters based on raw amplitude? - the amplitude view doesn't show the 'raw' amplitude type which was implemented https://github.com/cortex-lab/phy/issues/842 and...

TomBugnon

Hello. Based on a question that came up in the 2020 UCL Neuropixels course, Nick Steinmetz mentioned that the data that is plotted in FeatureView can be changed to a...

audrocks17

WaveformView displays noise

5

Hi, Phy WaveformView displays weird (line) noise in each cluster. I first thought that my data is screwed up or it is the problem of referencing (reference to the tip...

MarinaSlashcheva

Hi all, I'm using Kilosort2.5 for spike sorting 256 channels (128 + 2*64 probes - they are independent and in Kilosort channel map I set kcoord to 1,2,3). When I...

saman-abbaspoor

core dumped after QGLXContext: Failed to create dummy context

4

I'm using the lastest Phy version from the master repository in Ubuntu 18.04.4 and found the error indicated below. I installed the **PyQtWebEngine** with pip as suggested. I can reproduce...

JoseGuzman

Issue with OSError

1

In response to the phy template-gui params.py command I get the following error, any help would be greatly appreciated! (phy2) lyns-mbp-5240:Downloads lyn$ phy template-gui params.py 11:20:53.591 [E] __init__:62 An error...

Lyn-Ackert-Smith

Co-Curing multiple sessions worth of data

2

Hi! I was wondering if anyone has any cute tricks as far as trying to use Phy to cure data that has been clustered across multiple sessions. For example, is...

achristensen56