Chon Lok Lei
Chon Lok Lei
Currently when we output parameters, either in `pints.plot` or in `pints.io`, we call parameters as "p0","p1",... or "parameter 1", "parameter 2", ... First the numbering/naming is not consistent. Also maybe...
In [RectangularBoundaries](https://pints.readthedocs.io/en/stable/boundaries.html#pints.RectangularBoundaries) we specify a half-open interval. [RectangularBoundariesTransformation](https://pints.readthedocs.io/en/latest/transformations.html#pints.RectangularBoundariesTransformation), which makes totally sense to link to the RectangularBoundaries class (I think!), however, takes only an open interval. Not sure what's the...
Still need to decide whether we want to include model selection as part of PINTS, but at the very least we definitely want to show a notebook example of that...
Not sure if this is a good practice that in the `NestedSampler`, `self._needs_sensitivity` is always needed (e.g. `needs_sensitivities()` method), but it is never defined in the abstract class. At the...
Making a separate issue for using `Transformation` class in Nested Sampling, as mentioned in PR #1165: > Because we cannot sample from the transformed prior; we can sample only from...
Maybe we could have slightly better docs for this page: https://pints.readthedocs.io/en/latest/diagnostics.html#mcmc-diagnostics? For example what are the expected inputs and outputs. It took me a few minutes to figure it out,...
I know we'd run out of symbols at some point, but the `sigma0`s in [MCMCController](https://pints.readthedocs.io/en/latest/mcmc_samplers/running.html#pints.MCMCController) and [OptimisationController](https://pints.readthedocs.io/en/latest/optimisers/running.html#pints.OptimisationController) mean subtly different things, one is covariance matrix $\Sigma$ and the other is...
The Hierarchy of methods in docs: https://pints.readthedocs.io/en/latest/#hierarchy-of-methods needs updating. E.g. It's missing the Haario ones (under the Adaptive methods).