Computational Biology Group (CBG)

V-pipe is a pipeline designed for analysing NGS data of short viral genomes

cbg-ethz

Benchmarking data sets for haplotype reconstruction methods, sequenced with Illumina MiSeq, 454/Roche GSJunior, and Pacific Biosciences

cbg-ethz

Bayesian non-parametric clustering (BnpC) of binary data with missing values and uneven error rates

cbg-ethz

Computes a consensus sequence with wobbles, ambiguous bases, and in-frame insertions, from a NGS read alignment.

cbg-ethz

Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.

cbg-ethz

NGS-pipe: next-generation sequencing pipelines for precision oncology

cbg-ethz

Single-cell copy number calling and event history reconstruction.

cbg-ethz

cbg-ethz

cbg-ethz

Repo for the software suite ShoRAH (Short Reads Assembly into Haplotypes)

cbg-ethz