Biafra Ahanonu

Thanks for reaching out and the heads up about the Miji site (ciatah's been updated with a `mij.jar` backup URL). CIAtah uses Miji mainly to display movies and allow certain...

@chanduborkar That drift is in the raw movie before dF/F, likely due to slight motion within the movie (given the small absolute change in correlation from start to end) and...

@omidm7 Yep, seems `calciumImagingAnalysis.m` is missing that property on this repository (it's on my internal one). Let me know if the pull request below fixes the issue. I'll do a...

@omidm7 Do you mean the same error as before or a different one?

Does the regular expression for finding the movie match the movie name in the folder? e.g. highlighted text below:  I'll add a check for when the class can't find...

Only if a particular toolbox was not installed. If you type `license('test','Image_Toolbox')`, what is the output? Is your MATLAB from Stanford's CMGM (https://csbf.stanford.edu/software/)?

Strange, and you still get the license error for the image toolbox? If you try to use viewObjmaps or other functions besides CNMF-e, do you get errors?

Re-activating end up solving the issue?

Hey It is determined by https://github.com/bahanonu/calciumImagingAnalysis/blob/master/image/filterImages.m or if you have the class loaded, type `obj.filterImageOptions` for a list of some of the defaults that you can change. What does figure...

Thanks, what happens if you run PCA-ICA as a quick sanity check? Also, can you save the fig 46 and 4001 outputs as .fig files and attach them here so...