Alexis Arnaudon
Alexis Arnaudon
I'm not sure why trunk angle stuff is breaking... I'm looking
Test are passing but I'll add a little test for coverage later. Not convinced about the `only_root` option, to be discussed.
Imo it is still a view of MorphIO, and in fact, the current implementation is wrong. A neurite is defined as: ```Neurite: collection of consecutive sections of the same SectionType...
@mgeplf I don't understand why we would need heterogeneous? Do you agree with def of Neurite in my previous message? If yes, I don't see why we need to mix...
So this is the correct definition, right? What do you mean relax? From what def to what def?
So the real question is: can we call an axon emerging from a basal, a Neurite. If yes, my implementation is valid, if no, your heterogeneous proposal is valid. Let...
To me: a) yes, if you are interested in subtypes, such as trunk/obliques, etc... not if you are considering 'main' types axon/basal/apical. b) according to standard definition yes, but these...
Yes, here is another ref: https://www.frontiersin.org/articles/10.3389/fncel.2019.00570/full in 'misbheaving neurons' Mickael told me he does not know if we can call such axon a Neurite, and does not care, as long...
Figure 4 of the paper cited by lida is good in fact, to know how to model these guys.
> So to reply to @mgeplf we need to have two neurites: one axon (blue) starting from the dendrite, one dendrite (red) starting from the soma but excluding the axon....