B. Arman Aksoy
B. Arman Aksoy
@Georgehe4: can you let me know why you need the end coordinates? The variant track is currently tailored towards showing single nucleotide variants and the `main/vcf.js` reflects that as the...
thank you so much for reporting this issue, @max-l! I was hoping to get to this soon, but couldn't as other things got in the way. I will be away...
Thanks for reporting this issue, @cwuensch! Sounds like the browser is having problems keeping all those read information in the memory and eventually start having connectivity issues (NS error) due...
ah, I see. That 2bit file will require some more thinking then.
Food for thought: might be nice to have some dummy workflow nodes for these guys so that we can make our tools explicitly depend on them. If we change our...
Relevant discussions on this: https://github.com/hammerlab/biokepi/issues/193 and https://github.com/hammerlab/biokepi/issues/166
sorry @smondet — completely missed this conversation. We do get `3.5` from a ``Python3` environment. We currently delegate that decision about which specific Python version to install to conda and...
BTW: just looking at their documentation, looks they expect `a VEP-annotated single-sample VCF containing transcript, Wildtype protein sequence, and Downstream protein sequence information` as an input to their pipeline. This...
oops -- just realized that this breaks the test. I will fix that issue and update the PR.
B. Arman Aksoy @armish