Anthony Gitter

> all authors have associated manuscripts and methods but appear at the very beginning, not split accordingly at each chapter Yes, we set up author metadata that way so we...

The Manubot Python package has some [special processing](https://github.com/manubot/manubot/blob/c27e5b607a5724b21d198bcfea72c2687d09a262/manubot/process/util.py#L111-L142) that only runs on the list of `authors` in the metadata. If you define a different field to represent the authors, like...

All great ideas. I had played around with the oadoi links before but only briefly.

@twrightsman what author lists are you expecting to see for these two examples? The single consortium author matches what is shown at the publisher's site:   For the second...

Thanks. I understand the issue now.

I believe this is related to the changes in #319. I'll note that for `10.1038/nature08747`, the workaround of using Zotero isn't helpful. Zotero includes all of the "Consortia" information into...

Great question. I'll share some initial ideas and hope others will add to them. If the senior co-authors are not making major changes and the GitHub repository maintainer is willing...

> we'd like JOSS to be able to directly support submission of Manubot manuscript repositories That's super exciting!

@vincerubinetti that Google doc was linked in https://github.com/manubot/template/issues/1#issuecomment-572656954 You could move this post to that issue or add it as an overview document to that repository.

I'm interested in this as well. For pure markdown repositories ([example](https://github.com/agitter/single-cell-pseudotime)), I'm using [awesome_bot](https://github.com/dkhamsing/awesome_bot) to validate URLs. That wouldn't consider linked figures, tables, etc. It could be a partial short...