Zifeng Li

Error in pip install fitsne

9

Hi, here. I tried to install Fit-SNE by the command line "pip install fitsne". However, there seemed to be somthing wrong with gcc. `pip install fitsne` ``` Looking in indexes:...

Error in orig[[nm]][i, , ..., drop = drop] : subscript out of bounds

3

Hi, here. We used the ExpressionSet function to build the input datasets and run the MuSiC. However, there were something wrong. The single-cell datasets and bulk datasets were as follows....

2015年以前的无法爬取

1

``` nsfc query -s approval_year 2014 -s subject_code "%H08%" -o /cluster/home/zfli/H08.2014.xlsx -F xlsx [2021-04-14 00:24:58 STATS main INFO MainThread:72] input arguments: {'search': (('approval_year', '2014'), ('subject_code', '%H08%')), 'outfile': '/cluster/home/zfli/H08.2014.xlsx', 'format': 'xlsx',...

Dear authors, After reading the results and methods of this paper, I felt confused about the Pearson residual calculation. In Figure 2A, the FDR of each cell type was calculated...

Hi there! I tried the nextflow tool for running scenic. The command error happened in the following code : ``` 2022-05-17 00:43:43,002 - pyscenic.cli.pyscenic - INFO - Loading gene signatures....

Hi there! I tried these brilliant work tools following the tutorial. Then I tried the `mp_sparse_fixes` revision. How can I switch the revision into the initial revision and jumpover the...

problems with plot_cpdb using cellphonedb v5 outputs

1

Hello, here are some updates with cellphoneDB v5 outputs. The "means" and "pvals" file have been changed.  Because the column 'interacting_pair' is missing in the dataset, many functions in...