Lukas Heumos
Lukas Heumos
@ivirshup scvi tools also had an option (deprecated for some reason). See: https://github.com/theislab/ehrapy/issues/233 It's based on Rich tables (https://github.com/Textualize/rich). I use Rich excessively for everything when appropriate. But I like...
Could you provide a minimal example setup of this and the expected output?
Really cool @giovp and everyone involved. I can already see a couple of use-cases for ehrapy and am eager to see this move forward. Do you expect the support for...
Layer should already work? https://github.com/scverse/anndata/blob/f563dadad3fcf08d637a5ce1fb42c84d26481f8f/anndata/_core/anndata.py#L1321= Would you be interested in filing up a PR for obsm? Should not be too difficult...
Yeah, the docstring is malformed. You can look at the other working docstrings in the Python file for examples. Would be great if you could also add a quick fix...
Ahh, interesting. Thanks for looking into this. Let's resolve this step by step.
Hi, thank you very much for this high quality issue with even a small POC! > The number of columns in obs and var can also grow to the point...
Caused by: java.io.FileNotFoundException: /usr/lib/libnss3.so at sun.security.pkcs11.Secmod.initialize(Secmod.java:193) at sun.security.pkcs11.SunPKCS11.(SunPKCS11.java:218) ... 91 more Having the same issue. This is a breaking change!
@geleman Workaround is proposed here: https://github.com/docker-library/openjdk/issues/289 Make sure, that you remove this as soon as it got fixed!
Doesn't seem to be the case though.... https://github.com/python-poetry/poetry/issues/3514