Lukas Heumos
Lukas Heumos
> How did you install scanpy? What conda command did you use? And I'd appreciate an answer here. Just want to rule out that you used bioconda.
Honestly, I don't use Windows and somebody else needs to chip in here, sorry.
Are you two running Windows 10 or 11? @Yiquan-Jiang could you please also provide the full information? OS, environment etc
Guess we also ran into this https://github.com/theislab/ehrapy/issues/373#issuecomment-1108907602 Possible to handle internally in ehrapy, but maybe a solution in scanpy would be nicer.
@ivirshup are you looking for default colors for boolean variables?
yellow & blue like viridis is the gold standard I think. The default of orange & blue should work as well though.
> I don't love using viridis for this since: > > * One color is going to be much closer to the background > > * Libraries are pretty inconsistent...
Would you be interested in filing up a PR to improve this behavior? I'd encourage you to do so. Thank you!
Go ahead
Could you please provide a minimal working example? As stated: `Minimal code sample (that we can copy&paste without having any data)` This would help us examine the issue.