Viktor Petukhov

Results 94 comments of Viktor Petukhov

Hi @MobiTobi , that would be very useful! I'm currently working on a tool set for spatial analysis in Python ([baysorpy](https://github.com/VPetukhov/baysorpy)), which also will wrap julia calls to Baysor. If...

Regarding the main issue, I just released [v0.6](https://github.com/kharchenkolab/Baysor/releases/tag/v0.6.0), which resolves it, and also has a much faster triangulation-based method for polygon estimation (similar to ideas from [here](https://doi.org/10.1109/IVCNZ.2015.7761536)).

Apologies for the late response! The new [version 0.6.0](https://github.com/kharchenkolab/Baysor/releases/tag/v0.6.0) has a different method for polygon estimation, and shouldn't suffer from this problem. Please, let me know if it persists.

I changed image loading backend in the v0.6.0. So this hopefully should be fixed, though I didn't test properly. If anyone encounters this error, please, reopen the issue.

Hi, please see the answer here: https://github.com/kharchenkolab/Baysor/issues/56 . I couldn't make reliable mac binaries, so please, install it as a Julia package.

Thanks for the response, @arunchakra ! @Huimin721 , indeed, all CLI parameters override config parameters.

That's a great update! @madeleineudell , any chance you could just merge it?

> However, what was the inspiration for this code? It was python [scikit-image](https://github.com/scikit-image/scikit-image/blob/master/skimage/draw/_polygon2mask.py). Looks like they use [a variation](https://github.com/scikit-image/scikit-image/blob/master/LICENSE.txt) of the MIT license. > Could be possibly added to ImageDraw.jl...

Just realized that it does not exactly work, as the current `draw!` works only with `Colorant`, while working with a mask assumes it to be `Integer` or `Bool`. Maybe I'm...

Thanks for the quick answer! Got your point.