Viktor Petukhov

Results 94 comments of Viktor Petukhov

Have the same issue. The only mention of `_ZTVN4llvm2cl3optISsLb0ENS0_6parserISsEEEE` symbol in google is [iOS libLLVM header](http://developer.limneos.net/index.php?ios=6.0&framework=OpenGLES.framework&header=libLLVMContainer.dylib-Symbols.h), so I suppose that the symbol should be in libLLVM. Though inspecting it with...

```R graph_cl % .[1:2,] sims_per_clust % lapply(function(i) graph_cl[nns_per_clust[, i], i]) %>% setNames(colnames(nns_per_clust)) %>% lapply(function(x) x[x > 0]) color_set % colorRampPalette())(100) color_set_dists % apply(2, convertColor, "sRGB", "Lab") %>% t() %>% dist(method="minkowski",...

Actually, it looks like `FindAllMarkers` in Seurat only works with clustering tree, which we lack in most clustering algorithms. Maybe it would be possible to write a wrapper around [FindMarkers.default](https://github.com/satijalab/seurat/blob/master/R/differential_expression.R#L401).

Hi, When I was looking at different KDE implementations, R package [ks](https://cran.r-project.org/web/packages/ks/) was the most advanced one: it's able to do KDE on up to 6 dimensions. May be worth...

Julia 1.3.1, FFTW v1.2.0, KernelDensity v0.5.1

If I remember right, explicitly defining `ARMA_64BIT_WORD 1` caused problems in some cases. I have few understanding how it really works, but I remember struggling with some library incompatibilities. Though...

Hi Yubin, Could you please try it with 16-bit TIFF instead of 32-bit?

Let's see if I can fix it for 32-bit, as well

Thanks for the input, @JuanruMaryGuo ! Indeed, [LightGraphs.jl](https://github.com/sbromberger/LightGraphs.jl) were [archived](https://discourse.julialang.org/t/lightgraphs-jl-transition/69526/61) and now should be replaced with [Graphs.jl](https://github.com/JuliaGraphs/Graphs.jl). So I did that in the dev (https://github.com/kharchenkolab/Baysor/commit/ada8a77b4cdf0b91b5fefd2cd25ed987b695ed30) and now it seems to...