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Published 20 hours ago • verified publisher icon kharchenkolab

Issue with MacOS binaries

Open kleejin opened this issue 2 years ago • 3 comments

Hello, I am having trouble using the MacOS binaries, getting the following message. Any ideas?

./baysor --help Two passes with the same argument (-LowerPTLS) attempted to be registered! zsh: illegal hardware instruction ./baysor --help

kleejin avatar Feb 15 '22 20:02 kleejin

Hi, Can you please send your system details? Like OS version and hardware.

VPetukhov avatar Feb 15 '22 20:02 VPetukhov

OS info: ProductName: macOS ProductVersion: 11.6.2 BuildVersion: 20G314

My machine is a macbook pro Processor: 2.3 GHz 8-Core Intel Core i9 Memory: 32 GB 2667 MHz DDR4

kleejin avatar Feb 15 '22 21:02 kleejin

Hi, I have the same issue on my Macbook Pro: macOS Catalina 10.15.7 Processor: 2Ghz Quad-Core Intel Core i5 Memory: 16 Gb 3733 Mhz LPDDR4X

pander21 avatar Feb 20 '22 16:02 pander21

I also have a MacOS Apple M1 Max, and made it work following 10x GENOMICS instructions : https://www.10xgenomics.com/jp/resources/analysis-guides/using-baysor-to-perform-xenium-cell-segmentation Tools versions: python=3.9.12; julia-1.8.3 MacOS x86 no ARM version of Julia. Then installing 0.5.2 version of Baysor.

munizmom avatar Feb 28 '23 16:02 munizmom

Hi, please see the answer here: https://github.com/kharchenkolab/Baysor/issues/56 . I couldn't make reliable mac binaries, so please, install it as a Julia package.

VPetukhov avatar Apr 21 '23 08:04 VPetukhov