Torkel Loman
Torkel Loman
So I am starting to look at this, but have been updating to julia 1.1.0 and the latest version of DifferentialEquations so. This have caused some issues. Lets start with...
I guess it is up to how much trust one have in that the user keeps track on how things work. E.g. in this case (or at least in some...
I agree that this is a direction in which I would like to move the package (not only being a platform for making simulations, but providing some additional, related, utility)....
How would I write X --> Y catalyzed by Z? There are several options, e.g. these two are equivalent ```julia k11, X + Z --> Y + Z k11*Z, X...
It is true that the species are extracted directly from the reactions, with the result that the order of the species becomes the order in which they appear the the...
We might start thinking about keywords, as we are getting ideas for options like that they are probably the way to go. If one want to designate a whole lot...
I am not really sure I understand? You want option to automatically read text files with potentially different notation and make networks of them?
@chethega Maybe I understand, you suggest we should introduce a notation which is not Julia Dependants, or at least where all the functionality can be reached without Julia code? Now...
Good to hear about the `ModelingToolkit`, I will wait to see what @AleMorales says and we can discuss that further. What you are saying is that the problem is to...
@isaacsas Sounds good. I will start thinking of making some modifications to what info goes into the `ReactionStruct` structure, but adding dependencies sound like a good plan. @ChrisRackauckas Exactly what...