Torkel Loman comments

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                                            Torkel Loman

Trouble with interacting components

Thanks for the report. Haven't worked too much with the MTK's componnet-based stuff myself, but will try to look into this.

How to get the name of a species?

`nameof` returns the name of a `model` (e.g. a `ReactionSystem`), you have to use `ModelingToolkit.getname`: ```julia using Catalyst t = default_t() @species a(t) ModelingToolkit.getname(a) ``` gives ```julia :a ```

How to get the name of a species?

I'm not sure to be honest, you will have to ask over at MTK. Generally, unless something is fairly central to Catalyst, to avoid additional confusion, we try to avoid...

LoadError: AssertionError: @parameters expects a tuple of expressions or an expression of a tuple

Thanks for the report. I vaguely think I remember some similar issue from quite a while ago, but I have forgotten the details. I will have a look at it...

Add more Gillespie libraries

https://github.com/SciML/Catalyst_PLOS_COMPBIO_2023/blob/duplication_fix/Benchmarks/Catalyst/catalyst_make_benchmark.jl

feat: initial implementation of HomotopyContinuation interface

I haven't gone through properly, but one test case that def should be added is parametric exponents (e.g. x^n). If these are not handled properly (I.e. replaced with their value...

Overlap search and edit button

Just confirming that I run into this issue quite a lot (i.e. whenever I read docs on a vertical screen).

very long identifiability runtime for relatively small model

Thanks for the reply! Just happy to know that the sluggishness is a property of the model and nothing else. Generally, if I have something which takes like a day,...

very long identifiability runtime for relatively small model

Thanks a lot for that extra! Works flawlessly, could compute identifiability for my model, and a couple of variants of it, without any problems.