Tobias Baril

UPDATE: Tried running on one core, with the solution in #183, but still hitting an issue: ``` iqtree -s aphidSupermatrix.fa -bb 1000 -nt 1 -t PARS ``` ``` ERROR: STACK...

Unfortunately the fasta isn't publicly available, but the headers are here: https://drive.google.com/file/d/15mNTeTSvi30BZTOdQ6tB9kpl-q1-ovFb/view?usp=sharing

Ah Okay! This makes sense! I have implemented a pre-processing step in my pipeline to rename headers, so this should be fine for me now

Jumping on this after noticing the tag of RepeatMasker. There were some issues with permissions in the Azure DevOps environment which led to containers being pulled that were particularly large....

This is not as simple as many will think, due to version 4.1.6 requiring at least a several GB database to be configured, which cannot be stored and shared in...

Yes great idea! This worked for version 4.1.5 but the Perl configure script for 4.1.6 requires the actual file to correctly configure. I tried with a placeholder and it just...

I'm going to try and see if it will configure properly with a single entry from the small database, this seems like it is worth trying...

@bioconda/core test failing for out of space on test pipeline (common problem with RepeatMasker in Conda). Please advise on how to push this change as these updated requirements are needed...

Lots of errors in the linux test, related to permissions and some other bits I think? I'm not sure that this is linked to any changes made here though ```...

Build is successful, but same space errors in log as @wjunLu, any way to resolve and merge this change?