Moritz E. Beber
Moritz E. Beber
### What problem does this feature solve? At the moment there is a type definition for `NavigationGuard` in `router.d.ts`. This works nicely. Within that, the `next` argument is a function...
From the mailing list: > Thank you! That is very helpful. If I add a reaction, the metabolites are also added (good!) but all reactions from the universal model associated...
This is based on @MaxGreil's work. I simply rebased his branch onto the latest devel and added two methods. I did so because we need compartment objects soon in order...
Hi, I'm trying to gauge the general interest in and start a discussion around extracting some of cobrapy's core functionality into a separate package. The goal of the new package...
The documentation is broken (again). In order from most to least important, I think the following points might address this: 1. Instead of generating the auto API documentation on readthedocs...
Please voice your opinion here and state your use-case for the old behavior of setting bounds, i.e., constraining a reaction to a single flux value when setting the lower bound...
> We should make a benchmark action in the CI. That would be a good way to track those issues. _Originally posted by @cdiener in https://github.com/opencobra/cobrapy/issues/997#issuecomment-683314766_ What is a good...
We should strive to test on all solvers and this gives us the ability to at least test with CPLEX in a limited setting.
We decided some time ago to drop Python 2.7 and only support 3.6 and later versions. Our legacy codebase offers many opportunities for cleaning up old syntax. --- ## Check...
So far, we have been using pep8 for style checks. This has been deprecated for ages and I finally replaced it with flake8 in #969. However, flake8 checks are much...