KEMET

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add_taxonomy_from_gtdb-tk.py - help!

4

I am trying to run this script but it keeps returning with this "The genomes.instruction file has been updated with 0 genome(s) taxonomy indications, using '.fasta' extension" Could you please...

aksha19n

Hi, would it be possible to share the script that you are using to create .kk files? I need to pin the completeness analysis to a specific KEGG version that...

pbelmann

Error regarding output directory

7

Thank you for your code, but I encountered an issue when running it. This is how I used it. Under the 'eggnog' directory, there is a file named 'emapper.annotations', and...

timeresistance1996

Module completeness as stand-alone package

4

First of all, thank you for putting together this really great package. I find the module completeness assessment really unique, with only a few other lesser options out there (e.g.,...

Alxdu

conversion to python package

5

Any plans on making KEMET a legit python package that can be installed via pip (from pypi)? I see that the `setup.py` is non-standard. Converting the current code in the...

nick-youngblut