KEMET icon indicating copy to clipboard operation
KEMET copied to clipboard

Error regarding output directory

Open timeresistance1996 opened this issue 5 months ago • 7 comments

Thank you for your code, but I encountered an issue when running it.

This is how I used it. Under the 'eggnog' directory, there is a file named 'emapper.annotations', and under the 'genome' directory, there is a file named 'genome.fna'. The code I used is python ./kemet.py -I ./eggnog -a eggnog --skip_hmm --skip_gsmm ./genome -q --log --path_output ./output

However, an error occurred: FileNotFoundError: [Errno 2] No such file or directory: './output/ktests/'

Strangely, when I manually created the entire folder, the code seemed to run smoothly, but no output file was generated.

I got the same error even when using your test files.

timeresistance1996 avatar Jan 19 '24 04:01 timeresistance1996