HoneyBADGER

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Error in summarizeResults

3

Hi, I followed the "Getting Started" tutorial on the website to identify CNVs from expression data. I have no problem runing the functions until I run summarizeResults. The error is...

rosaranli

Hi I tried to run the example in the getting started session and get warnings message and error using the data provided by HoneyBADGER. I followed this session exactly as...

rosaranli

error in retestIdentifiedCnvs

4

Dear Jean, When I run the following code hb$retestIdentifiedCnvs(retestBoundGenes=TRUE, retestBoundSnps=TRUE, verbose=T), i get the following error: Error in as.vector(x) : no method for coercing this S4 class to a vector...

akdess

Error in calcAlleleCnvBoundaries

3

Dear Jean, first, congratulations for this method and the paper. I'm testing it on a set of Smart-seq2 data for which we have also WGS information available. I extracted the...

JLTrincado

mwiens91