isa-api
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ISA-tools
ISA tools API
- [ ] Force stable identifiers for serialization to RDF - [ ] Improves json context (low priority) - [x] Review deprecated functions from ISA-tab that should be used by...
allowed in ISA specifications and Schema - [ ] missing Class in model/datafiles.py - [ ] implement and test - [ ] provide example and document Fall back on using...
There needs to be more documentation directed at prospective developers who wish to contribute to ISA API (features/fixes), as the docs currently are targeted at developer-users only. This includes adding...
This is not critical as it would be extra information in the ISA files (and the validator only gives a warning), but within the set of curation functions, we can...
reported by John Matese at Princeton when converting SRP068846 http://www.ebi.ac.uk/ena/data/view/SRX1544187 also, the representation pattern used in this project departs from the one supported, which relies on defining 'multiplex identifier' as...
see isatatab/depecrated,py and isatab/rules/deprecated.py
- [x] ISALD - [x] ISAQL - [x] ISAcreate - [x] ISATAB writing performance improvement - [x] ISA JSON schemas fixes
- [ ] sirm - [ ] prs-to-fix - [ ] mtbls-assay-def - [ ] study_design_json_schemas - [ ] isa-book - [ ] prs-nmr-fix - [ ] metabo-biocrates - [...