Lon Blauvelt

Results 63 comments of Lon Blauvelt

@adthrasher Thanks for posting this! Will fix and use your examples as unit tests.

@claudiodonati Currently there isn't an option to do what you're asking directly that I'm aware of, though @mr-c might know of a way? I suppose as a way of getting...

@mr-c Thanks a bunch for doing this! Yes, I support moving it there. If you make me an owner of the repo I can transition it.

@jpuerto-psc Yes, I think that that would be an easy one to add. Will also follow up via email about assisting in general with HubMap work. I believe also that...

@stevekm Thank you for raising this issue. A cwltool fix should fix things in Toil. We'll try to stay apprised of developments there and update accordingly.

> @DailyDreaming It looks like right now [`toil launch-cluster` has a `--tag` option](https://github.com/DataBiosphere/toil/blob/da56ac10b4f1f8744be1dcea163527bcb2839473/src/toil/utils/toilLaunchCluster.py#L52-L62) to let you add tags to the things it makes, across all services, and this new variable...

@jsmedmar Apologies for the slow reply. That issue also seems to have been running 3.19.0, though I don't know of any PR that specifically fixed the issue, there have been...

https://github.com/DataBiosphere/toil/pull/4188 has not been merged yet. Damnable bot.

@tom-tan Thanks for the detailed report and how to reproduce the problem. Will look into a fix.

`boto` apparently allows for deletion requests of up to 1000 keys at a time, which stackoverflow reports as an order of magnitude faster in some cases: https://boto3.amazonaws.com/v1/documentation/api/latest/reference/services/s3.html#S3.Client.delete_objects https://stackoverflow.com/questions/11426560/amazon-s3-boto-how-to-delete-folder ``` s3...