Lon Blauvelt
Lon Blauvelt
@bentsherman The pvc.yml: ``` apiVersion: v1 kind: PersistentVolumeClaim metadata: name: whimvol spec: storageClassName: rook-cephfs accessModes: - ReadWriteMany resources: requests: storage: 5Gi ``` Created with: `kubectl apply -f pvc.yml` with the...
Creating the pod may have worked, as it scheduled/queued the workflow and attempted to launch. Running into some standard permission issues right now `cannot create resource \"jobs\" in API group...
@diekhans Just saw your comment on the issue. Looking into adding the `tmp` dir usage now.
Can you describe the use-case in more detail? I'm not sure that this is the best route, but I'd still like a path forward to making this clearer.
Generally I'm used to a separator between options. For example, if you run a program with argparse that calls another, you'd use: `--`, for say, the cwltest runner. So the...
Hmmm... we can discuss it in a future meeting. Could CAT do something like the following? ``` parser = argparse.ArgumentParser(description='Run CAT.') parser.add_argument('--toilWorkDir', help='A CAT option.') parser.parse_args() toil_config.workDir = args.toilWorkDir ```...
Oh, I agree with the general priority structure and believe that would be a good issue to work on.
This should be done and included in current CWL tests.
From Adam: "This might mean more documentation/a better version of the --doubleMemory thing I think we already have."
@adamnovak Is this ready for review?