George Pimm

Interesting. @aCoalBall can you confirm it still crashes if you don't do your downstream processing? I wouldn't expect the code above to retain the signals in memory unless you hold...

ok thanks. What is your environment like - what sort of OS, VMem, Physical Memory available etc? Thanks, - George

And can you confirm if you have a virtual memory limit on the system? eg: ``` george@host:~$ ulimit -v unlimited ```

Hi @aCoalBall, I've been running the below on a system similar to yours and not seen a crash yet... can you confirm this _does_ crash for you? My input file...

Hi @billytcl, I don't believe youre doing anything wrong - it looks like the dataset reduces in size by about 0.88... I agree I have seen more significant reductions in...

Hello! If you are using our supplied tools to start a protocol: https://github.com/nanoporetech/minknow_api/blob/master/python/minknow_api/tools/protocols.py#L350 you shouldnt need to use the extra args, instead just pass We have an example which turns...

Hi @Yang990-sys , More modern versions of minknow do not write analysis sections to fast5 files - this is not possible via the UI or the API. Whats your use...

Hello, In the latest versions of minknow (24.02), you can run: ``` > {minknow_install_dir}/bin/add_simulated_minion.sh # (there is also a bat file for windows) ``` This will create a simulated minion...

You can run a sequencing protocol on a simulated device, you can select playback data during run setup in the UI:  You can also start a run from the...

Hi Jens, Pause/Resume uses API that is not exposed right now. It should be possible - I will look to get the API + an example exposed for the next...